STRINGSTRING
Phatr46251 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46251" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46251Predicted protein (564 aa)    
Predicted Functional Partners:
Phatr47769
Predicted protein (522 aa)
   
          0.493
Phatr9947
Predicted protein (439 aa)
   
          0.489
Phatr18469
Predicted protein (547 aa)
   
          0.482
Phatr11826
TRD4 (475 aa)
   
          0.460
Phatr39515
Predicted protein (623 aa)
   
          0.459
Phatr2164
Predicted protein (474 aa)
   
          0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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