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STRINGSTRING
Phatr46289 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46289" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46289Predicted protein (338 aa)    
Predicted Functional Partners:
Phatr44512
Predicted protein (340 aa)
     
 
  0.994
Phatr15929
Predicted protein (202 aa)
     
 
  0.905
MARK3
Non-specific serine/threonine protein kinase (511 aa)
     
 
  0.710
Phatr48783
Predicted protein (402 aa)
     
 
  0.710
Phatr47036
Predicted protein (430 aa)
     
 
  0.710
Phatr35054
Predicted protein (621 aa)
     
 
  0.710
Phatr32914
Predicted protein (281 aa)
     
 
  0.710
Phatr18128
Predicted protein (247 aa)
     
 
  0.710
Phatr15229
Predicted protein (54 aa)
     
 
  0.710
Phatr46730
Predicted protein (1807 aa)
       
 
  0.661
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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