STRINGSTRING
Phatr46289 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46289" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46289Predicted protein (338 aa)    
Predicted Functional Partners:
Phatr44512
Predicted protein (340 aa)
     
  0.998
MARK3
Predicted protein (511 aa)
       
  0.963
Phatr13617
Predicted protein (201 aa)
     
  0.922
Phatr10104
Predicted protein (244 aa)
     
  0.922
Phatr47178
Predicted protein (182 aa)
       
  0.847
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
       
  0.847
Phatr13833
Predicted protein (443 aa)
       
  0.847
Phatr48783
Predicted protein (402 aa)
       
  0.826
Phatr47036
Predicted protein (430 aa)
       
  0.826
Phatr35054
Predicted protein (621 aa)
       
  0.826
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (9%) [HD]