STRINGSTRING
Phatr4634 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr4634" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr4634Predicted protein (196 aa)    
Predicted Functional Partners:
Phatr48656
Predicted protein (404 aa)
       
 
  0.436
Phatr48525
Predicted protein (417 aa)
       
 
  0.436
Phatr46802
Predicted protein (579 aa)
       
 
  0.436
Phatr46123
Predicted protein (434 aa)
       
 
  0.436
Phatr45411
Predicted protein (406 aa)
       
 
  0.436
Phatr42854
Predicted protein (768 aa)
       
 
  0.436
Phatr15768
Predicted protein (187 aa)
       
 
  0.436
Phatr18132
Predicted protein (377 aa)
           
  0.426
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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