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GDCT_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"GDCT_1" - Glycine decarboxylase t-protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDCT_1Glycine decarboxylase t-protein (892 aa)    
Predicted Functional Partners:
GDCH
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family (157 aa)
   
 
  0.756
Phatr1690
Predicted protein (495 aa)
   
   
  0.723
GDCP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine (1005 aa)
   
 
  0.665
Phatr23429
Predicted protein (615 aa)
     
   
  0.643
Phatr47067
Predicted protein (1237 aa)
   
   
  0.613
Phatr47550
Predicted protein (452 aa)
   
 
  0.560
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (464 aa)
   
 
  0.485
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (501 aa)
   
 
  0.485
SHMT
Serine hydroxymethyltransferase; Interconversion of serine and glycine; Belongs to the SHMT family (473 aa)
   
 
  0.485
Phatr48414
Predicted protein (593 aa)
     
   
  0.435
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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