STRINGSTRING
Phatr46417 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46417" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46417Predicted protein (482 aa)    
Predicted Functional Partners:
Phatr11894
Predicted protein (209 aa)
       
      0.560
Phatr19552
Predicted protein (529 aa)
       
      0.544
Phatr43105
Predicted protein (455 aa)
       
      0.539
Phatr30365
Predicted protein; Involved in the biogenesis of the 60S ribosomal subunit (677 aa)
       
      0.539
Phatr48430
Predicted protein (571 aa)
       
      0.512
Phatr46516
Predicted protein (1051 aa)
       
      0.479
Phatr12394
Predicted protein (260 aa)
       
 
  0.465
Phatr45356
Predicted protein (479 aa)
     
      0.448
helicase_6
Predicted protein (476 aa)
       
      0.443
Phatr25133
Predicted protein (562 aa)
     
      0.428
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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