STRINGSTRING
Phatr46448 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46448" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46448Predicted protein (281 aa)    
Predicted Functional Partners:
Phatr51134
Predicted protein (887 aa)
   
 
  0.688
Phatr26173
Predicted protein (768 aa)
   
 
  0.688
Phatr25856
Predicted protein (997 aa)
   
 
  0.688
Phatr16455
Predicted protein (683 aa)
   
 
  0.688
HSP70G
Protein heat shock protein (901 aa)
   
 
  0.609
BiP
ER luminal binding protein (659 aa)
   
 
  0.609
HSP70A
Protein heat shock protein Hsp70 (653 aa)
   
 
  0.609
HSP70B
Protein heat shock protein (681 aa)
   
 
  0.609
HSP70F
Heat shock protein Hsp70 (841 aa)
   
 
  0.609
Phatr37406
Predicted protein (245 aa)
   
 
  0.609
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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