STRINGSTRING
Phatr46479 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46479" - Translation initiation factor eif-2bgamma in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46479Translation initiation factor eif-2bgamma (758 aa)    
Predicted Functional Partners:
Phatr46656
Predicted protein (531 aa)
     
  0.997
Phatr14255
Predicted protein (326 aa)
     
  0.997
Phatr21290
Predicted protein (385 aa)
     
  0.996
Phatr10674
Predicted protein (290 aa)
     
  0.996
Phatrdraft358
Predicted protein (171 aa)
     
  0.984
Phatr42307
Predicted protein (453 aa)
   
  0.976
Phatr34538
Predicted protein (320 aa)
     
  0.974
Phatr27282
Predicted protein (171 aa)
     
  0.925
Phatr47039
Predicted protein (413 aa)
     
  0.797
Phatr50500
Predicted protein (358 aa)
   
 
  0.691
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (11%) [HD]