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STRINGSTRING
Phatr46568 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46568" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46568Predicted protein; Belongs to the AAA ATPase family (821 aa)    
Predicted Functional Partners:
Phatr31927
Predicted protein (321 aa)
     
 
  0.942
Phatr32173
Predicted protein (575 aa)
     
 
  0.934
Phatr47516
Predicted protein (403 aa)
     
 
  0.927
Phatr50623
Predicted protein (382 aa)
     
   
  0.925
Phatr49405
Predicted protein (415 aa)
     
 
  0.921
AOX1
Precursor of oxidase acyl-coa oxidase; Belongs to the acyl-CoA oxidase family (706 aa)
     
   
  0.801
Phatr22803
Predicted protein (608 aa)
     
   
  0.739
Phatr14397
Predicted protein; Belongs to the AAA ATPase family (172 aa)
   
 
0.710
Phatrdraft611
Predicted protein (130 aa)
     
 
  0.668
Phatr14449
Predicted protein (231 aa)
     
 
  0.668
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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