STRINGSTRING
Phatr46568 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46568" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46568Predicted protein (821 aa)    
Predicted Functional Partners:
Phatr14397
Predicted protein (172 aa)
   
 
0.878
Phatr31927
Predicted protein (321 aa)
     
 
  0.779
Phatr12252
Predicted protein (131 aa)
   
 
  0.685
Phatrdraft251
Predicted protein (168 aa)
   
 
  0.684
Phatr32173
Predicted protein (575 aa)
     
 
  0.586
Phatr8950
Predicted protein (252 aa)
     
 
  0.517
Phatr4937
Predicted protein (217 aa)
     
 
  0.517
Phatr42434
Predicted protein (484 aa)
     
 
  0.517
sCdc48
Predicted protein (797 aa)
   
 
0.468
Phatr47516
Predicted protein (403 aa)
       
 
  0.462
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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