STRINGSTRING
Phatr46595 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46595" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46595Predicted protein (480 aa)    
Predicted Functional Partners:
Phatr15730
Predicted protein (442 aa)
       
 
  0.608
Phatr8827
Predicted protein (219 aa)
     
   
  0.460
Phatr10378
Predicted protein (486 aa)
     
   
  0.433
Phatr44806
Predicted protein (585 aa)
     
   
  0.431
Phatr15692
Predicted protein (109 aa)
       
 
  0.429
Phatr22677
Dihydroderamide delta-4 desaturase (321 aa)
           
  0.422
Phatr9255
Predicted protein (278 aa)
     
 
  0.421
ELO6b_1
Delta 6 desaturase (216 aa)
     
 
  0.421
ELO6b_2
Elongase delta 6 elongase (278 aa)
     
 
  0.421
Phatr48977
Predicted protein (354 aa)
           
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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