STRINGSTRING
Phatr46613 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46613" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46613Predicted protein (798 aa)    
Predicted Functional Partners:
Phatr27735
Predicted protein (538 aa)
   
 
  0.810
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
  0.803
Phatr18087
Adenylosuccinate lyase (499 aa)
   
  0.680
Phatr15948
Predicted protein (262 aa)
       
  0.667
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity) (526 aa)
   
  0.657
PHATR_800
Predicted protein (505 aa)
       
  0.657
Phatr3559
Predicted protein (351 aa)
       
  0.657
Phatr22117
Predicted protein (407 aa)
       
  0.657
Phatr47178
Predicted protein (182 aa)
   
  0.576
Phatr44512
Predicted protein (340 aa)
   
  0.576
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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