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Phatr46664 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46664" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46664Predicted protein (691 aa)    
Predicted Functional Partners:
ACL
Atp-citrate synthase (1082 aa)
   
 
  0.613
Phatr48999
LCTP l-lactate permease (689 aa)
 
   
  0.585
Phatr37858
Predicted protein (398 aa)
       
  0.560
Phatr2738
Predicted protein (235 aa)
       
  0.560
Phatr12807
Predicted protein (326 aa)
       
  0.560
Phatr12269
Predicted protein (300 aa)
       
  0.560
Phatr50804
Glycolate oxidase (431 aa)
   
 
  0.541
GOX
Glycolate oxidase (381 aa)
   
 
  0.541
Phatr49253
Predicted protein (566 aa)
       
  0.493
ACC2
Biotin carboxylase (2282 aa)
   
   
  0.464
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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