STRINGSTRING
Phatr46706 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46706" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46706Predicted protein (335 aa)    
Predicted Functional Partners:
ACC2
Biotin carboxylase (2282 aa)
   
  0.993
Phatr21296
Biotin synthase (437 aa)
       
  0.940
ACC1
Acetyl-coa carboxylase (2092 aa)
   
  0.917
Phatr44930
Predicted protein (575 aa)
   
  0.728
Phatr37283
Predicted protein (1033 aa)
   
  0.728
Phatrdraft976
Predicted protein (321 aa)
   
  0.727
Phatr45886
Predicted protein (581 aa)
   
  0.727
Phatr19329
Predicted protein (597 aa)
   
  0.727
Phatr48350
Predicted protein (1773 aa)
         
  0.601
PHATR_843
Predicted protein (467 aa)
       
  0.591
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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