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STRINGSTRING
Phatr46736 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46736" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46736Predicted protein (404 aa)    
Predicted Functional Partners:
Phatr16141
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (373 aa)
           
  0.898
Phatr36743
Predicted protein (149 aa)
     
   
  0.870
Phatr9115
Predicted protein (240 aa)
     
 
  0.836
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
     
   
  0.800
Phatr18027
Predicted protein (706 aa)
     
   
  0.800
Phatr29793
Predicted protein (424 aa)
           
  0.800
Phatr21557
Predicted protein (348 aa)
     
        0.742
Phatr54710
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (410 aa)
     
   
  0.737
Phatr17184
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (445 aa)
     
   
  0.737
Phatr9235
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1147 aa)
     
   
  0.725
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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