STRINGSTRING
Phatr46770 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46770" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46770Predicted protein (412 aa)    
Predicted Functional Partners:
Phatr44670
Predicted protein (317 aa)
       
  0.667
Phatrdraft474
Predicted protein (605 aa)
   
 
  0.656
Phatrdraft315
Predicted protein (497 aa)
   
 
  0.656
Phatrdraft116
Predicted protein (418 aa)
   
 
  0.656
Phatr9634
Predicted protein (480 aa)
   
 
  0.656
Phatr50296
Predicted protein (528 aa)
   
 
  0.656
Phatr50081
Predicted protein (569 aa)
   
 
  0.656
Phatr50052
Predicted protein (932 aa)
   
 
  0.656
Phatr46850
Predicted protein (745 aa)
   
 
  0.656
Phatr45536
Predicted protein (839 aa)
   
 
  0.656
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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