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GALE1 protein (Phaeodactylum tricornutum) - STRING interaction network
"GALE1" - UDP-glucose 4-epimerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALE1UDP-glucose 4-epimerase (358 aa)    
Predicted Functional Partners:
UGDH1
UDP-glucose 6-dehydrogenase (475 aa)
   
 
  0.968
Phatr54493
Udp-n-acetylglucosamine diphosphorylase (600 aa)
   
 
  0.937
GALK1
Galactokinase (397 aa)
   
 
  0.932
SQD1
UDP-sulfoquinovose synthase, plastid (456 aa)
         
    0.900
Phatr44406
Predicted protein (1782 aa)
   
 
  0.863
Phatr27190
Predicted protein (365 aa)
   
   
 
0.804
Phatr23281
Predicted protein (319 aa)
   
   
  0.642
Phatr15125
Predicted protein (311 aa)
     
  0.609
Phatr50500
Predicted protein (358 aa)
     
  0.597
Phatr48864
Reductase with NAD or NADP as acceptor (395 aa)
     
  0.597
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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