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STRINGSTRING
Phatr46838 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46838" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46838Predicted protein (405 aa)    
Predicted Functional Partners:
Phatr43664
Predicted protein (655 aa)
     
 
  0.998
Phatr10954
Predicted protein (209 aa)
     
 
  0.976
Pt-KIF3
Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (953 aa)
     
 
  0.954
Phatr54534
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (451 aa)
     
 
  0.937
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
 
  0.936
Phatr44165
Structural maintenance of chromosomes protein (1356 aa)
     
 
  0.926
SMC2
Structural maintenance of chromosomes protein (1213 aa)
     
 
  0.902
Phatr45008
Predicted protein (480 aa)
     
 
  0.878
Phatr12339
Predicted protein (275 aa)
     
 
  0.878
SMC1
Predicted protein (1237 aa)
     
 
  0.838
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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