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STRINGSTRING
Phatr46872 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46872" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46872Predicted protein (670 aa)    
Predicted Functional Partners:
Phatr48495
Predicted protein; Belongs to the peptidase S8 family (472 aa)
   
          0.422
Phatr48494
Predicted protein; Belongs to the peptidase S8 family (582 aa)
   
          0.421
Phatr48492
Predicted protein; Belongs to the peptidase S8 family (488 aa)
   
          0.421
Phatr38966
Predicted protein; Belongs to the peptidase S8 family (555 aa)
   
          0.421
Phatr48491
Predicted protein; Belongs to the peptidase S8 family (401 aa)
   
          0.420
Phatr48484
Predicted protein; Belongs to the peptidase S8 family (380 aa)
   
          0.420
Phatrdraft1558
Predicted protein; Belongs to the peptidase S8 family (526 aa)
   
          0.419
Phatrdraft1554
Predicted protein; Belongs to the peptidase S8 family (521 aa)
   
          0.419
Phatr50210
Predicted protein; Belongs to the peptidase S8 family (521 aa)
   
          0.419
Phatr48496
Predicted protein; Belongs to the peptidase S8 family (460 aa)
   
          0.418
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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