STRINGSTRING
Phatr46891 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46891" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46891Predicted protein (1007 aa)    
Predicted Functional Partners:
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
       
      0.661
Phatr42732
Predicted protein (408 aa)
       
      0.639
Phatr22658
Predicted protein (405 aa)
       
      0.639
Phatr16343
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation (165 aa)
       
      0.628
Phatr48390
Predicted protein (1780 aa)
     
 
  0.529
Phatr41094
Predicted protein (378 aa)
       
      0.529
Phatr44239
Predicted protein (1180 aa)
     
 
  0.528
Phatr4700
Predicted protein (325 aa)
     
 
  0.505
Phatr43499
Predicted protein (676 aa)
     
 
  0.427
Sec13
Predicted protein (330 aa)
       
 
  0.407
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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