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STRINGSTRING
Phatr46912 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr46912" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr46912Predicted protein (693 aa)    
Predicted Functional Partners:
Phatrdraft1413
Predicted protein (379 aa)
       
 
  0.791
Phatr10628
Serine/threonine-protein kinase PLK (575 aa)
     
 
  0.680
Phatr17300
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes (439 aa)
     
   
  0.573
Phatr45914
Predicted protein (746 aa)
     
 
  0.564
Phatr46440
Predicted protein (1030 aa)
     
   
  0.537
Phatr48647
Predicted protein (636 aa)
           
  0.536
Phatr47127
Predicted protein (517 aa)
     
 
  0.509
CATR1
Caltractin (151 aa)
     
 
  0.493
CATR2
Caltractin (192 aa)
     
 
  0.493
Phatr22873
Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (303 aa)
     
   
  0.476
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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