Full Link:
STRINGSTRING
Phatr47025 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47025" - Alanine racemase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47025Alanine racemase (710 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
     
 
  0.981
Phatr24739
Predicted protein (1594 aa)
     
 
  0.981
Phatr47550
Predicted protein (452 aa)
   
 
  0.642
Phatr44549
Predicted protein (443 aa)
   
 
  0.642
Phatr40271
Predicted protein (446 aa)
   
 
  0.642
Phatr39247
Predicted protein (430 aa)
   
 
  0.642
Phatr31544
Predicted protein (1033 aa)
   
 
  0.642
Phatrdraft475
Predicted protein (464 aa)
       
  0.540
Phatr34010
Predicted protein (475 aa)
       
  0.540
Phatr47067
Predicted protein (1237 aa)
         
  0.463
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (4%)