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Phatr47057 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47057" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47057Predicted protein (1458 aa)    
Predicted Functional Partners:
Phatr50326
Predicted protein (998 aa)
     
 
  0.780
Phatr16155
Predicted protein (153 aa)
     
 
  0.774
Phatr45692
Predicted protein (700 aa)
     
 
  0.562
Phatr22703
Predicted protein (311 aa)
     
 
  0.562
Phatr47826
Predicted protein (777 aa)
     
 
  0.536
Phatr12234
GABAR1 G protein-coupled GABA receptor (421 aa)
     
 
  0.536
Phatr52678
DNA polymerase (2155 aa)
     
 
  0.499
Phatr15233
Predicted protein (151 aa)
     
 
  0.480
Phatr43677
Predicted protein (813 aa)
     
 
  0.473
Phatr38965
Predicted protein (1383 aa)
     
 
  0.473
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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