• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr47075 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47075" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47075Predicted protein (473 aa)    
Predicted Functional Partners:
Phatr47297
Predicted protein (416 aa)
         
  0.645
Phatr8828
Predicted protein (291 aa)
           
  0.617
Phatr12985
Predicted protein (132 aa)
           
  0.582
Phatr16807
Predicted protein (193 aa)
           
  0.538
Phatr15207
Predicted protein (191 aa)
           
  0.538
Phatr17427
Predicted protein (695 aa)
           
  0.532
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]