STRINGSTRING
Phatr47099 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47099" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47099Predicted protein (324 aa)    
Predicted Functional Partners:
Phatr27039
Predicted protein (634 aa)
     
  0.997
Phatr17885
Predicted protein (73 aa)
     
  0.754
Sec61alpha
Transport protein Sec61 alpha subunit (472 aa)
     
  0.717
Phatr54789
Predicted protein (1205 aa)
       
      0.593
HSP70G
Protein heat shock protein (901 aa)
     
 
  0.446
HSP70A
Protein heat shock protein Hsp70 (653 aa)
     
 
  0.438
HSP70B
Protein heat shock protein (681 aa)
     
 
  0.438
Hsp70_2
Predicted protein (646 aa)
     
 
  0.438
Phatr17772
Predicted protein (1313 aa)
           
  0.428
Phatr35185
Predicted protein (448 aa)
           
  0.426
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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