STRINGSTRING
Phatr47152 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47152" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47152Predicted protein (437 aa)    
Predicted Functional Partners:
Phatr12984
Predicted protein (96 aa)
   
   
  0.642
Phatr19901
Predicted protein (900 aa)
   
   
  0.624
Phatr46656
Predicted protein (531 aa)
   
 
  0.594
Phatr46479
Translation initiation factor eif-2bgamma (758 aa)
   
 
  0.594
Phatr50500
Predicted protein (358 aa)
       
  0.589
Phatr48864
Reductase with NAD or NADP as acceptor (395 aa)
       
  0.589
Phatr41088
Predicted protein (344 aa)
       
  0.589
Phatr35637
Predicted protein (635 aa)
       
  0.589
Phatr31257
Predicted protein (354 aa)
       
  0.589
Phatr15125
Predicted protein (311 aa)
       
  0.589
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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