• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr47297 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47297" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47297Predicted protein (416 aa)    
Predicted Functional Partners:
Phatr50796
Predicted protein (457 aa)
   
      0.943
Phatr23748
Predicted protein (67 aa)
     
 
  0.939
Phatr28147
Predicted protein (62 aa)
     
      0.937
Phatr9199
Predicted protein; Belongs to the universal ribosomal protein uS15 family (151 aa)
   
 
  0.935
Phatrdraft477
Predicted protein (82 aa)
     
      0.933
Phatr19314
Predicted protein (125 aa)
     
      0.930
Phatr43840
Predicted protein (110 aa)
     
      0.930
Phatr31073
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family (188 aa)
     
      0.928
Phatr47804
Predicted protein (94 aa)
     
      0.927
Phatr19152
Predicted protein (157 aa)
     
      0.926
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]