STRINGSTRING
Phatr47389 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47389" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47389Predicted protein (591 aa)    
Predicted Functional Partners:
Phatrdraft1611
PhospholipasePredicted protein (889 aa)
     
 
  0.654
Phatrdraft1000
PhospholipasePredicted protein (889 aa)
     
 
  0.654
PLC-delta
Phospholipase C isoform delta (865 aa)
     
 
  0.654
Rab11
Predicted protein (214 aa)
       
  0.570
Phatr9639
Predicted protein (545 aa)
     
  0.558
Phatr47992
Predicted protein (432 aa)
     
  0.550
Phatr43088
Predicted protein (1279 aa)
       
  0.531
Phatr23224
Predicted protein (710 aa)
       
  0.531
Phatr7164
Predicted protein (170 aa)
     
 
  0.521
Phatr21501
Predicted protein (175 aa)
     
 
  0.521
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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