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MAT1 protein (Phaeodactylum tricornutum) - STRING interaction network
"MAT1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAT1Predicted protein (294 aa)    
Predicted Functional Partners:
ERCC2
Xeroderma pigmentosum group D complementing protein (782 aa)
     
  0.989
Phatr3295
Predicted protein (156 aa)
       
  0.975
Phatr12118
Predicted protein (137 aa)
       
  0.975
CDKD1
Predicted protein (304 aa)
       
  0.975
Phatr20574
Predicted protein (720 aa)
       
  0.975
Phatr44108
Predicted protein (358 aa)
       
  0.975
Phatr43960
Predicted protein (641 aa)
     
  0.963
TFIIH-p44
Suppressor of stem-loop protein 1 (413 aa)
     
  0.914
CYCL1
Predicted protein (193 aa)
       
  0.880
CYCH1
Predicted protein (272 aa)
       
  0.874
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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