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Phatr47395 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47395" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47395Predicted protein (331 aa)    
Predicted Functional Partners:
Phatr23292
L-galactono-1,4-lactone dehydrogenase (572 aa)
         
  0.902
Phatr46616
L-ascorbate peroxidase (327 aa)
         
0.818
Phatr13174
L-ascorbate peroxidase (277 aa)
   
   
0.814
Phatr20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)
     
 
  0.669
Phatr45431
Predicted protein (1158 aa)
     
 
  0.559
Phatr15852
Predicted protein (138 aa)
       
  0.533
P5CS
Delta l-pyrroline-5-carboxylate synthetase (747 aa)
         
  0.513
Phatr18027
Predicted protein (706 aa)
         
  0.513
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
       
  0.496
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
       
  0.496
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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