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STRINGSTRING
Phatr47412 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47412" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47412Predicted protein (1256 aa)    
Predicted Functional Partners:
Phatr2097
Predicted protein; Belongs to the DEAD box helicase family (552 aa)
     
 
  0.702
Phatr45915
Predicted protein (1242 aa)
     
 
  0.695
Phatr23582
Predicted protein (764 aa)
     
 
  0.695
Phatr47619
Predicted protein (1565 aa)
     
 
  0.529
Phatr27039
Predicted protein (634 aa)
   
 
  0.489
Phatr47896
Predicted protein (1543 aa)
     
 
  0.481
Phatr18258
Predicted protein (743 aa)
     
      0.477
Phatr45692
Predicted protein (700 aa)
     
 
  0.456
Phatr22703
Predicted protein (311 aa)
     
 
  0.456
Phatr45727
Predicted protein (948 aa)
     
 
  0.423
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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