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STRINGSTRING
Phatr47422 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47422" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47422Predicted protein (166 aa)    
Predicted Functional Partners:
Phatr45431
Histone deacetylase (1158 aa)
      
 
  0.518
Phatr33660
Predicted protein (253 aa)
        
 
  0.493
Phatr44306
Predicted protein (865 aa)
      
 
  0.415
Phatr21660
Serine/threonine-protein kinase TOR (2400 aa)
      
 
  0.415
Phatr46058
Formin like protein (2015 aa)
      
 
  0.404
Phatr36142
Predicted protein (320 aa)
      
 
  0.403
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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