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Pt-MAD1 protein (Phaeodactylum tricornutum) - STRING interaction network
"Pt-MAD1" - Mitotic spindle assembly checkpoint protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pt-MAD1Mitotic spindle assembly checkpoint protein (1315 aa)    
Predicted Functional Partners:
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
 
  0.994
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3 (397 aa)
     
 
  0.933
Phatr10954
Predicted protein (209 aa)
     
 
  0.915
Phatr45008
Predicted protein (480 aa)
     
 
  0.886
Phatr12339
Predicted protein (275 aa)
     
 
  0.886
Phatr13192
Predicted protein (74 aa)
     
      0.790
Phatr35556
Predicted protein (1902 aa)
     
 
  0.771
Phatrdraft79
Predicted protein (444 aa)
     
 
  0.710
Phatr45416
Predicted protein (632 aa)
     
 
  0.710
CDH1
Predicted protein (326 aa)
     
 
  0.710
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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