STRINGSTRING
Phatr47492 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47492" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47492Predicted protein (640 aa)    
Predicted Functional Partners:
Phatr44745
Predicted protein (1075 aa)
       
  0.922
Phatr3171
Predicted protein (220 aa)
     
 
  0.878
Phatr7114
Predicted protein (136 aa)
     
  0.647
Phatrdraft218
Predicted protein (125 aa)
     
  0.636
Hsp70_1
Predicted protein (673 aa)
     
  0.602
Phatr45953
Predicted protein (857 aa)
     
  0.577
Rbx1
Predicted protein (134 aa)
       
      0.527
Phatr23164
Predicted protein (489 aa)
     
 
  0.499
Phatr43646
Predicted protein (572 aa)
       
      0.475
Phatr44351
Predicted protein (510 aa)
     
   
  0.461
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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