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Phatr47496 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47496" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47496Predicted protein (359 aa)    
Predicted Functional Partners:
Phatr32097
Predicted protein (368 aa)
     
  0.976
Phatr30898
Vacuolar protein (429 aa)
     
  0.976
Phatr31375
Predicted protein (168 aa)
     
  0.954
Phatr18620
Predicted protein (222 aa)
     
  0.842
Phatr11901
Predicted protein (168 aa)
     
  0.781
Phatr6433
Predicted protein (143 aa)
     
  0.766
Phatr5904
Predicted protein (206 aa)
     
  0.766
Phatr49220
Predicted protein (217 aa)
     
 
  0.564
Phatr42051
Predicted protein (579 aa)
       
      0.501
Phatr41016
Predicted protein (460 aa)
       
      0.501
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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