STRINGSTRING
Phatr47576 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47576" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47576Predicted protein (574 aa)    
Predicted Functional Partners:
Phatrdraft559
Predicted protein (368 aa)
   
 
  0.958
Phatr7678
Predicted protein (134 aa)
   
 
  0.958
Phatr6288
Predicted protein (190 aa)
       
  0.903
Phatr43010
Predicted protein (219 aa)
         
    0.900
Phatr47250
Phosphatidate cytidylyltransferase (574 aa)
   
 
  0.604
Phatr8663
Predicted protein (187 aa)
     
 
  0.509
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
       
 
  0.507
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
       
 
  0.507
Phatr44189
Predicted protein (1560 aa)
     
 
  0.466
Phatr47992
Predicted protein (432 aa)
     
  0.462
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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