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Phatr47620 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47620" - P2B, P type ATPase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47620P2B, P type ATPase (1118 aa)    
Predicted Functional Partners:
CBP
Calcium binding protein (132 aa)
       
 
  0.719
CaM2
Calmodulin (154 aa)
       
 
  0.719
CaM1
Calmoduline (149 aa)
       
 
  0.719
Phatr21744
Predicted protein (149 aa)
       
 
  0.719
ATPase1-P5
P5, P type ATPase (1138 aa)
     
 
  0.571
CATR1
Caltractin (151 aa)
       
 
  0.567
CATR2
Caltractin (192 aa)
       
 
  0.567
Phatr16222
Predicted protein (521 aa)
   
   
  0.555
Phatr2762
Predicted protein (324 aa)
       
 
  0.514
Phatr11387
Predicted protein (348 aa)
       
 
  0.514
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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