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STRINGSTRING
Phatr47656 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47656" - Uncharacterized protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47656Uncharacterized protein; Transporter (1166 aa)    
Predicted Functional Partners:
Phatr38549
Predicted protein (1128 aa)
     
   
  0.629
Phatr36270
Predicted protein (1987 aa)
     
   
  0.629
Phatr50149
Amino acid transporter (535 aa)
   
   
  0.441
Phatr46672
Predicted protein (1347 aa)
   
   
  0.441
Phatr13047
Predicted protein; Adenylyl cyclase-associated protein (137 aa)
     
        0.410
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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