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ISIP3 protein (Phaeodactylum tricornutum) - STRING interaction network
"ISIP3" - Iron starvation induced protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISIP3Iron starvation induced protein (390 aa)    
Predicted Functional Partners:
ISIP1
Iron starvation induced protein (569 aa)
           
  0.510
Phatr55108
Heat shock factor (718 aa)
           
  0.478
NRPS
Non ribosomal peptide synthase (1367 aa)
           
  0.461
Phatr51092
Glutamine synthetase (416 aa)
           
  0.426
ISIP2A
Iron starvation induced protein (537 aa)
           
  0.424
Phatr23658
Flavodoxin (207 aa)
           
  0.422
Phatr13706
Flavodoxin (176 aa)
           
  0.422
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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