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STRINGSTRING
Phatr47845 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47845" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47845Predicted protein (620 aa)    
Predicted Functional Partners:
Phatrdraft1633
Predicted protein (388 aa)
     
 
  0.789
Phatr45024
Predicted protein (560 aa)
     
 
  0.665
Phatr12516
Predicted protein (147 aa)
           
  0.646
Phatr49071
Predicted protein (730 aa)
           
  0.642
Phatr3832
Predicted protein (349 aa)
   
 
  0.640
Phatr40880
Agmatinase; Belongs to the arginase family (416 aa)
           
  0.620
Phatrdraft1393
Predicted protein (518 aa)
 
 
 
  0.614
Phatr31559
Predicted protein (297 aa)
           
  0.582
GDCP
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine (1005 aa)
           
  0.580
Phatr18319
Adenosylhomocysteinase (481 aa)
     
 
  0.566
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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