STRINGSTRING
MIZF protein (Phaeodactylum tricornutum) - STRING interaction network
"MIZF" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIZFPredicted protein (491 aa)    
Predicted Functional Partners:
Phatr30960
Predicted protein (313 aa)
     
        0.796
Phatr2182
Predicted protein (360 aa)
     
 
  0.780
Phatr21996
Predicted protein (417 aa)
     
 
  0.770
Phatr15862
Predicted protein (530 aa)
     
 
  0.770
Phatr19438
Predicted protein (529 aa)
     
 
  0.736
Phatr29217
Predicted protein (406 aa)
     
 
  0.732
Phatr36016
Predicted protein (455 aa)
     
 
  0.662
Phatr12394
Predicted protein (260 aa)
     
        0.620
Phatr8777
Predicted protein (110 aa)
     
      0.616
Phatr13281
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (181 aa)
     
        0.609
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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