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Phatr47936 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47936" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47936Predicted protein (2798 aa)    
Predicted Functional Partners:
Phatr21122
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
       
  0.975
EB1
Predicted protein (256 aa)
       
  0.970
Phatr54534
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (451 aa)
       
  0.967
Phatr43664
Predicted protein (655 aa)
     
  0.876
Gamma-tub
Predicted protein; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
  0.853
Phatr48451
Separase protein (2039 aa)
     
  0.852
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
  0.831
SMC1
Predicted protein (1237 aa)
     
  0.782
Pt-KIF13
Kinesin family-like protein (138 aa)
     
  0.770
Pt-KIF8
Kinesin family-like protein (280 aa)
     
  0.770
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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