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Phatr47968 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr47968" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr47968Predicted protein (4524 aa)    
Predicted Functional Partners:
CBP
Calcium binding protein (132 aa)
       
      0.555
CaM2
Calmodulin (154 aa)
       
      0.555
CaM1
Calmoduline (149 aa)
       
      0.555
Phatr21744
Predicted protein (149 aa)
       
      0.555
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
     
        0.493
Phatr24739
Predicted protein (1594 aa)
     
        0.493
HSP70A
Protein heat shock protein Hsp70 (653 aa)
       
      0.475
HSP70B
Protein heat shock protein (681 aa)
       
      0.475
Hsp70_2
Predicted protein (646 aa)
       
      0.475
Phatr43830
Vacuolar protein sorting-associated protein 35 (1712 aa)
     
 
  0.443
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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