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Phatr48163 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48163" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48163Predicted protein (783 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
     
  0.853
Phatr10628
Predicted protein (575 aa)
       
  0.695
Phatr3924
Predicted protein (325 aa)
     
    0.635
Phatr48350
Predicted protein (1773 aa)
   
 
  0.630
Phatr45596
Predicted protein (736 aa)
       
  0.616
Phatr36569
Predicted protein (166 aa)
     
  0.596
CUL1_3
CULlin protein 1 (741 aa)
     
  0.596
CUL1_1
CULlin protein 3 (762 aa)
     
  0.596
CUL1_2
CULlin protein 4 (821 aa)
       
  0.583
Phatr9090
Predicted protein (431 aa)
       
  0.580
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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