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Phatr48328 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48328" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48328Predicted protein (447 aa)    
Predicted Functional Partners:
Phatr6927
Predicted protein (163 aa)
     
      0.465
Phatr54049
Acetyl-coa transporter (646 aa)
     
      0.465
Phatr43754
Tetracycline resistance protein (493 aa)
     
      0.465
Phatr43646
Predicted protein (572 aa)
     
      0.465
Phatr43382
Predicted protein (555 aa)
     
      0.465
Phatr33590
Predicted protein (577 aa)
     
      0.465
Phatr32095
Predicted protein (679 aa)
     
      0.465
Phatr32014
Predicted protein (467 aa)
     
      0.465
Phatr30620
Glucose transport protein (515 aa)
     
      0.465
Phatr12520
Predicted protein (434 aa)
     
      0.465
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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