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STRINGSTRING
Phatr48376 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48376" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48376Predicted protein (381 aa)    
Predicted Functional Partners:
Phatr10544
Predicted protein (496 aa)
     
 
  0.780
Phatr5424
Predicted protein (154 aa)
     
 
  0.744
Phatr13534
Predicted protein (120 aa)
     
   
  0.742
SAS1
Regulator of chromatin silencing (624 aa)
     
 
  0.720
Phatr13820
Predicted protein (282 aa)
     
      0.698
Phatr44687
Predicted protein (426 aa)
     
   
  0.680
Phatr32646
Predicted protein (268 aa)
     
   
  0.678
Phatr45871
Predicted protein (944 aa)
     
 
  0.671
Phatr8777
Predicted protein (110 aa)
     
      0.663
Phatr46837
Predicted protein (997 aa)
     
   
  0.662
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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