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Phatr48381 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48381" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48381Predicted protein (715 aa)    
Predicted Functional Partners:
Phatr15613
Predicted protein (123 aa)
     
 
  0.883
Phatr51157
Actin/actin like proteinPredicted protein (377 aa)
       
 
  0.719
ARP1
Actin related protein (391 aa)
       
 
  0.719
ACT1
Actin/actin like proteinPredicted protein (377 aa)
       
 
  0.719
Act2
Actin (377 aa)
       
 
  0.719
Phatr9601
Protein of f-actin capping protein (214 aa)
     
 
  0.685
UBC1
Ubiquitin carrier protein (197 aa)
       
      0.547
Phatr18404
Predicted protein (512 aa)
       
      0.527
Phatr2087
Thymidylate synthase (217 aa)
       
      0.501
Phatr1690
Predicted protein (495 aa)
       
      0.501
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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