• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PTD12 protein (Phaeodactylum tricornutum) - STRING interaction network
"PTD12" - Precursor of desaturase omega-6 desaturase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTD12Precursor of desaturase omega-6 desaturase (495 aa)    
Predicted Functional Partners:
PTD9
Desaturase delta 9 desaturase; Belongs to the fatty acid desaturase type 1 family (333 aa)
     
   
  0.749
Phatr50443
Predicted protein (517 aa)
     
   
  0.658
Phatr22510
Predicted protein (453 aa)
     
   
  0.658
PTD6
Delta 6 fatty acid desaturase (477 aa)
 
 
   
  0.656
Phatr43010
Predicted protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (219 aa)
           
  0.582
PTD5a
Delta 5 fatty acid desaturase (469 aa)
     
   
  0.580
PTD5b
Delta 5 fatty acid desaturase (455 aa)
     
   
  0.579
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
         
  0.423
Phatr9794
Predicted protein; Belongs to the membrane-bound acyltransferase family (404 aa)
           
  0.414
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (10%) [HD]