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Phatr48451 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48451" - Separase protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48451Separase protein (2039 aa)    
Predicted Functional Partners:
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
     
 
  0.956
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
     
 
  0.956
SMC1
Predicted protein (1237 aa)
     
  0.903
Phatr10628
Predicted protein (575 aa)
     
  0.889
Phatr45008
Predicted protein (480 aa)
     
 
  0.879
Phatr12339
Predicted protein (275 aa)
     
 
  0.879
Pt-KIF3
Kinesin family-like protein (953 aa)
     
  0.879
APC8
Predicted protein (648 aa)
     
  0.870
APC6
Predicted protein (381 aa)
     
  0.866
Phatr45416
Predicted protein (632 aa)
     
  0.865
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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