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Phatr48529 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48529" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48529Predicted protein (386 aa)    
Predicted Functional Partners:
Phatr38130
Predicted protein (199 aa)
     
  0.957
Phatr32097
Predicted protein (368 aa)
     
  0.736
Phatr30898
Vacuolar protein (429 aa)
     
  0.736
Phatr49632
Predicted protein (420 aa)
       
  0.671
Phatr28874
Predicted protein (410 aa)
       
  0.671
NRPS
Non ribosomal peptide synthase (1367 aa)
       
      0.588
Phatr19669
Predicted protein (202 aa)
       
  0.474
Phatrdraft383
Predicted protein (346 aa)
     
  0.461
UPL1
Ubiquitin-protein ligase 1 (166 aa)
     
  0.461
Phatr42123
Predicted protein (343 aa)
     
  0.461
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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