STRINGSTRING
Phatr48699 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48699" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48699Predicted protein (217 aa)    
Predicted Functional Partners:
Phatr25375
Predicted protein (201 aa)
 
  0.999
Phatr31919
Predicted protein (305 aa)
   
  0.999
Phatr6847
Predicted protein (167 aa)
 
  0.999
rpl14
Predicted protein (143 aa)
   
  0.999
Phatr23324
Predicted protein (176 aa)
   
  0.999
Phatr23691
Predicted protein (130 aa)
 
  0.999
rpl2
Predicted protein (257 aa)
   
  0.999
Phatr30486
Predicted protein (146 aa)
 
  0.999
Phatr43162
Predicted protein (146 aa)
   
  0.999
Phatr33660
Predicted protein (253 aa)
   
  0.999
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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