STRINGSTRING
Phatr48797 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr48797" - Annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr48797Annotation not available (350 aa)    
Predicted Functional Partners:
Phatr29633
Predicted protein (949 aa)
   
        0.556
Phatr48517
Predicted protein (403 aa)
 
        0.531
Phatr48600
Predicted protein (451 aa)
   
          0.522
Phatr45361
Predicted protein (331 aa)
   
          0.503
Phatr11248
Predicted protein (167 aa)
           
  0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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